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Bergamaschi et al., 2005
Bergamaschi, P., Krol, M., Dentener, F., Vermeulen, A., Meinhardt, F., Graul, R., Ramonet, M., Peters, W., and Dlugokencky, E. J. (2005).
Inverse modelling of national and European CH4 emissions using the atmospheric zoom model TM5.
Atmos. Chem. Phys., 5:2431-2460.
Paper in ACP.

Bergamaschi et al., 2006
Bergamaschi, P., Meirink, J. F., Müller, J. F., Körner, S., Heimann, M., Bousquet, P., Dlugokencky, E. J., Kaminski, U., Vecchi, R., Marcazzan, G., Meinhardt, F., Ramonet, M., Sartorius, H., and Zahorowski, W. (2006).
Model Inter-comparison on Transport and Chemistry - report on model inter-comparison performed within European Commission FP5 project EVERGREEN.
Scientific and Technical Research series EUR 22241 EN, DG Joint Research Centre, Institute for Environment and Sustainability.
ISBN 92-79-02001-3, 53 pp.
Report on JRC website.

Berkvens et al., 1999
Berkvens, P. J. F., Botchev, M. A., Lioen, W. M., and Verwer, J. G. (1999).
A zooming technique for wind transport of air pollution.
In Vilsmeier, R., Hanel, D., and Benkhaldoun, F., editors, Finite Volumes for Complex Applications, Proceedings of the 2nd International Symposium on Finite Volumes for Complex Applications (Duisburg, Germany, July 19-22, 1999), pages 499-506. Hermes Publisher.
An extended version is available as CWI Report MAS-R9921 with a full description of the zoom algorithm.

Bregman et al., 2003
Bregman, A., Segers, A. J., Krol, M. C., Meijer, E., and van Velthoven, P. (2003).
On the use of mass-conserving wind fields in chemistry-transport models.
Atmos. Chem. Phys., 3(2):447-457.
Paper in ACP.

Bregman et al., 2006
Bregman, B., Meijer, E., and Scheele, R. (2006).
Key aspects of stratospheric tracer modeling using assimilated winds.
Atmos. Chem. Phys., 6(12):4529-4543.
Paper in ACP.

Holtslag and Boville, 1993
Holtslag, A. A. and Boville, B. A. (1993).
Local versus nonlocal boundary-layer diffusion in a global climate model.
J. Climate, 10:1825-1842.

Hooghiemstra, 2006
Hooghiemstra, P. (2006).
Towards advection on a full reduced grid for TM5.
Technical Report TR-294, KNMI, De Bilt, The Netherlands.
Download pdf.

Krol et al., 2005
Krol, M., Houweling, S., Bregman, B., van den Broek, M., Segers, A., van Velthoven, P., Peters, W., Dentener, F., and Bergamaschi, P. (2005).
The two-way nested global chemistry-transport zoom model TM5: algorithm and applications.
Atmos. Chem. Phys., 5(2):417-432.
Paper in ACP.

Krol et al., 2003
Krol, M., Lelieveld, J., Oram, D., Sturrock, G., Penkett, S., Brenninkmeijer, C., Gros, V., Williams, J., and Scheeren, H. (2003).
Continuing emissions of methyl chloroform from Europe.
Nature, 421:131-135.
Download pdf.

Louis, 1979
Louis, J. F. (1979).
A parametric model of vertical eddy fluxes in the atmosphere.
Boundary Layer Meteorology, 17:187-202.

Olivié, 2005
Olivié, D. J. L. (2005).
On the role of convection and turbulence for tropospheric ozone and its precursors.
PhD thesis, Technical University of Eindhoven, The Netherlands.
Online version.

Olivié et al., 2004
Olivié, D. J. L., van Velthoven, P. F. J., and Beljaars, A. C. M. (2004).
Evaluation of archived and off-line diagnosed vertical diffusion coefficients from ERA-40 with $^{222}$Rn simulations.
Atmos. Chem. Phys., 4(9/10):2313-2336.
Paper in ACP.

Peters, 2003
Peters, W. (2003).
TM5 manual for parallel version.
Research document.
Online version.

Peters et al., 2004
Peters, W., Krol, M. C., Dlugokencky, E. J., Dentener, F. J., Bergamaschi, P., Dutton, G., van Velthoven, P., Miller, J. B., Bruhwiler, L., and Tans, P. P. (2004).
Toward regional-scale modeling using the two-way nested global model TM5: Characterization of transport using SF6.
J. Geophys. Res., 109(D19):D19314.

Petersen et al., 1998
Petersen, A. C., Spee, E. J., van Dop, H., and Hundsdorfer, W. (1998).
An evaluation and intercomparison of four new advection schemes for use in global chemistry models.
J. Geophys. Res., 103(D15):19,253-19,269.
Paper in JGR.

Prather, 1986
Prather, M. (1986).
Numerical advection by conservation of second-order moments.
J. Geophys. Res., 91:6671-6681.

Russell and Lerner, 1981
Russell, G. L. and Lerner, J. A. (1981).
A new finite-differencing scheme for the tracer transport equation.
J. Appl. Meteorol., 20:1483-1498.

Segers et al., 2002
Segers, A., van Velthoven, P., Bregman, B., and Krol, M. (2002).
On the computation of mass fluxes for Eulerian transport models from spectral meteorological fields.
In Sloot, P., Tan, C. K., Dongarra, J., and Hoekstra, A., editors, Proceedings of the 2002 International Conference on Computational Science, volume 2330/2002 of Lecture Notes in Computer Science (LNCS), pages 767-776. Springer Verlag.
Online available.

Tiedtke, 1989
Tiedtke, M. (1989).
A comprehensive mass flux scheme for cumulus parameterization in large-scale models.
Mon. Weather. Rev., 117(8):1779-1800.

van den Broek et al., 2000
van den Broek, M. M. P., Bregman, A., and Lelieveld, J. (2000).
Model study of stratospheric chlorine activation and ozone loss during the 1996/1997 winter.
J. Geophys. Res., 105(D23):28961-28978.
Paper in JGR.

van den Broek et al., 2003
van den Broek, M. M. P., van Aalst, M. K., Bregman, A., Krol, M., Lelieveld, J., Toon, G. C., Garcelon, S., Hansford, G. M., Jones, R. L., and Gardiner, T. D. (2003).
The impact of model grid zooming on tracer transport in the 1999/2000 arctic polar vortex.
Atmos. Chem. Phys., 3(5):1833-1847.
Paper in ACP.

van den Broek et al., 2004
van den Broek, M. M. P., Williams, J. E., and Bregman, A. (2004).
Implementing growth and sedimentation of nat particles in a global eulerian model.
Atmos. Chem. Phys., 4(7):1869-1883.
Paper in ACP.

van Noije et al., 2004
van Noije, T. P. C., Eskes, H. J., van Weele, M., and van Velthoven, P. F. J. (2004).
Implications of the enhanced Brewer-Dobson circulation in European Centre for Medium-Range Weather Forecasts reanalysis ERA-40 for the stratosphere-troposphere exchange of ozone in global chemistry transport models.
J. Geophys. Res., 109(D19):D19308.

Williams et al., 2006
Williams, J. E., Landgraf, J., Bregman, A., and Walter, H. H. (2006).
A modified band approach for the accurate calculation of online photolysis rates in stratospheric-tropospheric chemistry transport models.
Atmos. Chem. Phys., 6(12):4137-4161.
Paper in ACP.

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